STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcemethylmalonyl-CoA epimerase; [E] COG0346 Lactoylglutathione lyase and related lyases. (136 aa)    
Predicted Functional Partners:
EED32900.1
[I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding).
  
 0.983
EED32901.1
LAO/AO transport system ATPase; [E] COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family.
 
  
 0.946
NOR53_216
[I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding).
 
  
 0.897
EED32897.1
[I] COG0777 Acetyl-CoA carboxylase beta subunit.
 
 
 0.878
NOR53_344
Hypothetical protein; [I] COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit; putative Probable methylmalonyl-CoA mutase; EC_number=5.4.99.2.
 
  
 0.830
NOR53_128
LAO/AO transport system ATPase; [E] COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family.
 
  
 0.781
NOR53_861
Putative Rieske (2Fe-2S) domain protein; [PR] COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
       0.776
EED32898.1
Biotin-requiring enzyme domain protein; [I] COG0439 Biotin carboxylase.
 
  
  0.725
EED32676.1
Putative methylmalonyl-CoA decarboxylasealpha-subunit; [I] COG0825 Acetyl-CoA carboxylase alpha subunit.
 
 
 0.710
EED31664.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
  
  
 0.694
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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