STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33516.1[V] COG1132 ABC-type multidrug transport system, ATPase and permease components. (599 aa)    
Predicted Functional Partners:
EED32193.1
ABC transporter, permease/ATP-binding protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
 
0.790
EED31575.1
ABC transporter, ATP-binding protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
 
0.776
EED33517.1
Conserved hypothetical protein.
       0.775
msbA
Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. Belongs to the ABC transporter superfamily. Lipid exporter (TC 3.A.1.106) family.
  
 
0.767
NOR53_836
ParA family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
    
 0.571
NOR53_910
Protein-tyrosine kinase; [D] COG0489 ATPases involved in chromosome partitioning.
    
 0.571
EED33520.1
Putative threonine dehydratase biosynthetic; [E] COG0498 Threonine synthase.
       0.532
NOR53_686
YeeE/YedE; [R] COG2391 Predicted transporter component.
       0.532
NOR53_764
Gene II and x protein; [R] COG2391 Predicted transporter component.
       0.532
feoB
Ferrous iron transport protein B; [R] COG1084 Predicted GTPase.
       0.456
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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