Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED33516.1[V] COG1132 ABC-type multidrug transport system, ATPase and permease components. (599 aa)    
Predicted Functional Partners:
EED33517.1
Conserved hypothetical protein.
       0.776
EED32193.1
ABC transporter, permease/ATP-binding protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
 
0.753
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
     
  0.742
EED31575.1
ABC transporter, ATP-binding protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
 
0.736
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.698
msbA
Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. Belongs to the ABC transporter superfamily. Lipid exporter (TC 3.A.1.106) family.
    
 0.692
sufD
FeS assembly protein SufD; [O] COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
    
 0.664
sufB
FeS assembly protein SufB; [O] COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
   
 0.664
NOR53_947
Diguanylate cyclaSe/phosphodiesterase (ggdef & eal domains) with pas/pac sensor(s); [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
  
  
 0.591
EED31577.1
ABC transporter; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
  
  
 0.584
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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