STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_196Band 7 protein; [O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs. (264 aa)    
Predicted Functional Partners:
NOR53_169
[OU] COG1585 Membrane protein implicated in regulation of membrane protease activity.
 
  
 0.968
ftsH
Metalloprotease (cell division protein) FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.954
hflK
HflK protein; HflC and HflK could encode or regulate a protease.
  
   
 0.665
EED33201.1
Rhomboid family protein; [R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
   
 0.634
EED33221.1
Peptidase M16 inactive domain family protein; [R] COG0612 Predicted Zn-dependent peptidases.
  
 0.598
NOR53_714
Hypothetical protein; [R] COG0612 Predicted Zn-dependent peptidases; putative peptidaseM16 family.
   
 0.581
EED31902.1
Conserved hypothetical protein; [K] COG1678 Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
  
    0.526
pacL
Cation-transporting ATPase, E1-E2 family; [P] COG2217 Cation transport ATPase.
 
 
 0.516
NOR53_192
Hypothetical protein.
   
 0.500
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.500
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.