Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EED32636.1UspA; [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins. (289 aa)    
Predicted Functional Partners:
EED32637.1
Sulphate transporter; [P] COG0659 Sulfate permease and related transporters (MFS superfamily).
   
 0.965
napA_1
[P] COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain.
       0.504
EED32635.1
Hypothetical protein; [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; alpha/beta hydrolase fold.
       0.497
ada
ADA regulatory protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
   
    0.465
EED32170.1
Conserved hypothetical protein.
  
     0.457
EED32639.1
Protein containing DUF88; [S] COG1432 Uncharacterized conserved protein.
       0.444
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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