STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33300.1[P] COG3540 Phosphodiesterase/alkaline phosphatase D. (359 aa)    
Predicted Functional Partners:
EED31774.1
[P] COG1785 Alkaline phosphatase; Belongs to the alkaline phosphatase family.
 
 
 0.847
EED31840.1
[C] COG0584 Glycerophosphoryl diester phosphodiesterase.
  
 
 0.733
folB
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.664
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
       0.571
EED33302.1
[I] COG0657 Esterase/lipase.
       0.570
NOR53_658
MutT/nudix family protein; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
  
  0.545
folE_2
[H] COG0302 GTP cyclohydrolase I.
    
 0.542
folE_1
[H] COG0302 GTP cyclohydrolase I.
    
 0.542
pepN-2
[E] COG0308 Aminopeptidase N.
  
     0.474
EED33304.1
Hypothetical protein.
       0.448
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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