STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_203[T] COG0642 Signal transduction histidine kinase. (406 aa)    
Predicted Functional Partners:
NOR53_25
Two component, sigma54 specific, transcriptional regulator, Fis family; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
 
 0.954
fliE
[NU] COG1677 Flagellar hook-basal body protein.
 
 
 0.949
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.907
NOR53_215
[T] COG0642 Signal transduction histidine kinase.
 
 
 0.906
EED33682.1
[T] COG0642 Signal transduction histidine kinase.
 
 0.878
EED31684.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
 
0.869
EED32586.1
Adenylate cyclase 1 (ATP pyrophosphate-lyase 1); [T] COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
  
 
 0.848
NOR53_370
Flagellar biosynthesis protein; [U] COG0552 Signal recognition particle GTPase.
 
  
 0.837
EED32585.1
Two-component response regulator; [T] COG0784 FOG: CheY-like receiver.
  
 
 0.783
EED32584.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.783
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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