Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EED33597.1[P] COG1629 Outer membrane receptor proteins, mostly Fe transport. (705 aa)    
Predicted Functional Partners:
NOR53_142
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
    0.715
EED33258.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  
  0.708
EED32869.1
TonB-dependent receptor, plug; [H] COG4206 Outer membrane cobalamin receptor protein.
  
    0.704
EED32855.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.691
EED32757.1
Conserved hypothetical protein.
  
  
  0.686
EED31148.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.686
EED31702.1
[P] COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
  
     0.684
EED31447.1
[H] COG4206 Outer membrane cobalamin receptor protein.
  
     0.682
EED32644.1
Porin.
  
  
  0.677
EED31834.1
[P] COG4772 Outer membrane receptor for Fe3+-dicitrate.
  
     0.677
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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