Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED33208.1[P] COG3119 Arylsulfatase A and related enzymes. (524 aa)    
Predicted Functional Partners:
EED31083.1
Conserved hypothetical protein.
 
     0.726
EED31606.1
Conserved hypothetical protein.
 
     0.725
EED32123.1
Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat.
 
     0.711
EED33211.1
Dehydrogenase/reductase sdr family member 4; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
  0.587
NOR53_911
[I] COG1960 Acyl-CoA dehydrogenases.
       0.565
EED31107.1
Carbohydrate-selective porin, OprB family.
  
     0.564
NOR53_831
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.562
EED33210.1
[I] COG1960 Acyl-CoA dehydrogenases.
       0.557
EED31082.1
Conserved hypothetical protein.
  
     0.554
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
   
 
  0.495
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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