STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33982.1[P] COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (348 aa)    
Predicted Functional Partners:
EED33981.1
Hemin import ATP-binding protein HmuV; [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
 0.999
hmuT
Hemin ABC transporter, periplasmic hemin-binding protein; [P] COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 
 0.997
EED32627.1
Hemin import ATP-binding protein HmuV; [G] COG1129 ABC-type sugar transport system, ATPase component.
 
 
 0.988
EED33984.1
TonB-dependent heme/hemoglobin receptor family protein; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.778
hutZ
Heme-binding protein HutZ; [P] COG0748 Putative heme iron utilization protein.
 
    0.617
EED33985.1
Conserved hypothetical protein; [P] COG3721 Putative heme iron utilization protein.
 
   
 0.519
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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