STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_207[S] COG3551 Uncharacterized protein conserved in bacteria. (413 aa)    
Predicted Functional Partners:
chlD
Protoporphyrin IX Magnesium chelatase subunit ChlD; [H] COG1239 Mg-chelatase subunit ChlI.
  
 0.755
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
  0.657
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
 
 
 0.645
ppiD
Probable peptidyl-prolyl cis-trans isomerase transmembrane protein; [O] COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
   0.619
EED31895.1
Transcriptional regulator, ArsR family; [K] COG0640 Predicted transcriptional regulators.
   
 0.606
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 
 0.606
NOR53_47
Glycosyl transferase, family 2; [M] COG0438 Glycosyltransferase.
 
 0.591
coq7
Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 0.562
NOR53_1
Teichoic acids export ATP-binding protein TagH; [V] COG1131 ABC-type multidrug transport system, ATPase component.
 
 
  0.543
wzt
ABC transporter ATP-binding protein; [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 
  0.536
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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