STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pobA4-hydroxybenzoate 3-monooxygenase; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. (402 aa)    
Predicted Functional Partners:
EED33367.1
Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
 
   
 0.779
EED32850.1
Reductive dehalogenase; [C] COG1600 Uncharacterized Fe-S protein.
  
  
 0.778
ligB_2
Protocatechuate 4,5-dioxygenase beta chain; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  
 0.746
EED33674.1
[I] COG0657 Esterase/lipase.
  
 0.693
ligA_4
Protocatechuate 4,5-dioxygenase, alpha subunit.
  
  
 0.690
EED33376.1
[Q] COG2124 Cytochrome P450.
  
  0.654
vanA
Vanillate demethylase A; [PR] COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
  
 
 0.647
ligB_1
Protocatechuate 4,5-dioxygenase beta chain; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  
  0.626
EED32838.1
Protocatechuate 4,5-dioxygenase beta chain; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  
  0.619
ligA_2
Protocatechuate 4,5-dioxygenase, alpha subunit.
  
  
 0.616
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.