Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NOR53_208Hypothetical protein. (431 aa)    
Predicted Functional Partners:
NOR53_255
Hypothetical protein.
   
   0.832
sucA
[C] COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
    
 
 0.813
NOR53_199
Putative secreted proteincontaining von Willebrand factor (vWF) type A domain taxon:283942.
       0.810
NOR53_416
Secreted protein, containing von Willebrand factor (vWF) type A domain.
       0.801
EED32126.1
Hamp domain protein; [NT] COG0840 Methyl-accepting chemotaxis protein.
  
 
  0.788
NOR53_215
[T] COG0642 Signal transduction histidine kinase.
  
 
 0.783
EED31684.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
  
 
 0.774
EED33682.1
[T] COG0642 Signal transduction histidine kinase.
  
 
 0.772
NOR53_668
Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
  
 0.741
NOR53_77
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
 
 0.731
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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