STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32695.1OmpW family protein; [M] COG3047 Outer membrane protein W. (234 aa)    
Predicted Functional Partners:
hemN
Oxygen-independent coproporphyrinogen III oxidase; [KB] COG1243 Histone acetyltransferase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.900
ccoO
[C] COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
    0.846
ccoN
[C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.752
ccoG
Cytochrome c oxidase accessory protein CcoG; [C] COG0348 Polyferredoxin.
 
    0.712
ppk_1
Polyphosphate kinase 2; [S] COG2326 Uncharacterized conserved protein.
   
    0.695
EED32344.1
PvdS; [S] COG2326 Uncharacterized conserved protein.
   
    0.695
NOR53_225
[S] COG2841 Uncharacterized protein conserved in bacteria.
  
    0.579
NOR53_715
Trypsin domain protein.
       0.550
NOR53_431
[T] COG1734 DnaK suppressor protein.
  
  
 0.508
EED32382.1
[H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.448
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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