STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32681.1Conserved hypothetical protein; [R] COG3897 Predicted methyltransferase. (204 aa)    
Predicted Functional Partners:
EED32682.1
[K] COG1278 Cold shock proteins.
       0.773
NOR53_308
Hypothetical protein.
  
     0.717
EED33110.1
Conserved hypothetical protein; [R] COG3313 Predicted Fe-S protein.
  
     0.677
NOR53_707
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.663
EED33036.1
leucyl/phenylalanyl-tRNA--protein transferase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.662
EED31931.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.637
EED32683.1
Putative 'Cold-shock' DNA-binding domain protein; [K] COG1278 Cold shock proteins.
       0.631
EED31877.1
Conserved hypothetical protein TIGR02449; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.618
NOR53_248
Conserved hypothetical protein.
  
     0.616
EED32439.1
[M] COG3317 Uncharacterized lipoprotein.
  
     0.596
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.