STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33544.1Glutathione S-transferase, N-terminal domain; [O] COG0625 Glutathione S-transferase. (213 aa)    
Predicted Functional Partners:
gstch
[O] COG0625 Glutathione S-transferase.
  
  
  0.798
EED33545.1
Hypothetical protein.
       0.773
NOR53_733
Alcohol dehydrogenase, zinc-binding domain protein; [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
    0.733
EED31602.1
[O] COG0625 Glutathione S-transferase.
  
  
  0.706
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.633
gstA
[O] COG0625 Glutathione S-transferase.
  
  
0.593
EED32331.1
[O] COG0625 Glutathione S-transferase.
  
  
 0.571
EED33537.1
[O] COG0625 Glutathione S-transferase.
  
  
  0.564
echA
[I] COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
    0.541
EED33865.1
glutamyl-tRNA(Gln) amidotransferase C subunit; [O] COG0625 Glutathione S-transferase.
  
  
 0.531
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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