STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33297.1[M] COG2982 Uncharacterized protein involved in outer membrane biogenesis. (1140 aa)    
Predicted Functional Partners:
EED33296.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.773
EED33295.1
Amino acid permease family protein; [E] COG0531 Amino acid transporters.
       0.639
EED31662.1
Rubrerythrin.
  
     0.624
EED31835.1
Putative sodium/proline symporter; [S] COG3924 Predicted membrane protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.568
EED33783.1
Conserved hypothetical protein; [S] COG5488 Integral membrane protein.
  
     0.516
EED31776.1
Hypothetical protein; [LKJ] COG0513 Superfamily II DNA and RNA helicases; signal peptide.
  
     0.458
EED33294.1
UbiA prenyltransferase; [H] COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase.
       0.449
EED33139.1
[R] COG1988 Predicted membrane-bound metal-dependent hydrolases.
 
     0.445
EED33680.1
Conserved hypothetical protein; [NT] COG0840 Methyl-accepting chemotaxis protein.
  
     0.439
phaF
Polyhydroxyalkanoate synthesis protein PhaF; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.433
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.