Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EED33871.1[S] COG3105 Uncharacterized protein conserved in bacteria. (154 aa)    
Predicted Functional Partners:
EED32815.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.729
zapE
AFG1-family ATPase; Reduces the stability of FtsZ polymers in the presence of ATP.
       0.620
rpsI
[J] COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
 
     0.549
NOR53_771
[S] COG3139 Uncharacterized protein conserved in bacteria.
  
     0.496
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.486
EED31876.1
[S] COG3079 Uncharacterized protein conserved in bacteria; Belongs to the UPF0149 family.
  
     0.450
petB
ubiquinol-Cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
       0.448
EED33091.1
Putative glutaredoxin domain family protein; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.447
EED31395.1
Sensor histidine kinase/response regulator; [T] COG0642 Signal transduction histidine kinase.
  
     0.434
NOR53_921
[V] COG3725 Membrane protein required for beta-lactamase induction.
  
     0.426
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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