Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gspG_1General secretion pathway protein G; [U] COG4537 Competence protein ComGC. (143 aa)    
Predicted Functional Partners:
gspJ_1
General secretion pathway protein J; [U] COG4795 Type II secretory pathway, component PulJ.
 
 0.976
gspD_1
General secretion pathway protein D; [NU] COG1450 Type II secretory pathway, component PulD.
 
 0.970
gspK
General secretion pathway protein K; [U] COG3156 Type II secretory pathway, component PulK.
 
 
 0.946
gspE_1
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.945
gspF_1
General secretion pathway protein F; [NU] COG1459 Type II secretory pathway, component PulF.
 
  
 0.943
gspC
General secretion pathway protein C; [U] COG3031 Type II secretory pathway, component PulC.
 
  
 0.867
gspH_1
General secretion pathway protein H.
    
 0.838
gspD_2
General secretion pathway protein D; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
 
 0.827
gspI
General secretion pathway protein I; [NU] COG2165 Type II secretory pathway, pseudopilin PulG.
 
  
 0.813
gspL
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.775
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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