Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EED33738.1NADH:flavin oxidoreductase/nadh oxidase family protein; [C] COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family. (358 aa)    
Predicted Functional Partners:
EED32226.1
[E] COG0070 Glutamate synthase domain 3.
    
  0.758
NOR53_376
Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.628
EED32994.1
[C] COG2086 Electron transfer flavoprotein, beta subunit.
  
 0.623
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.620
etfA
[C] COG2025 Electron transfer flavoprotein, alpha subunit.
   
 0.609
EED32850.1
Reductive dehalogenase; [C] COG1600 Uncharacterized Fe-S protein.
    
 0.588
EED33737.1
rRNA (guanine-N(1)-)-methyltransferase; [QR] COG0500 SAM-dependent methyltransferases.
       0.581
EED33739.1
Phospholipase A1; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.
       0.528
EED31184.1
Transcriptional regulator, TetR family; [K] COG1309 Transcriptional regulator.
  
  
 0.500
EED33736.1
2-nitropropane dioxygenase, NPD; [R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
       0.459
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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