rsmI protein (gamma proteobacterium NOR53) - STRING interaction network

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rsmI

Conserved hypothetical protein TIGR00096; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (279 aa)

Predicted Functional Partners:

rpsF

0.829

rpsD

0.826

rpsN

0.824

rpsB

0.819

rpsU

0.819

rpsO

0.813

rpsQ

0.808

rpsP

0.806

rpsG

0.796

rpsS

0.790

Your Current Organism:

gamma proteobacterium NOR53

NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpsB	rpsD	NOR53_2127	NOR53_193	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rpsB	rpsF	NOR53_2127	NOR53_111	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Na+/solute symporter; Binds together with S18 to 16S ribosomal RNA.	0.999
rpsB	rpsG	NOR53_2127	NOR53_184	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.999
rpsB	rpsN	NOR53_2127	NOR53_8	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.999
rpsB	rpsO	NOR53_2127	NOR53_2745	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999
rpsB	rpsP	NOR53_2127	NOR53_1976	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	[J] COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.999
rpsB	rpsQ	NOR53_2127	NOR53_286	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
rpsB	rpsS	NOR53_2127	NOR53_218	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rpsB	rpsU	NOR53_2127	NOR53_506	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	[J] COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.999
rpsB	rsmI	NOR53_2127	NOR53_2142	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Conserved hypothetical protein TIGR00096; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.819
rpsD	rpsB	NOR53_193	NOR53_2127	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.999
rpsD	rpsF	NOR53_193	NOR53_111	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Na+/solute symporter; Binds together with S18 to 16S ribosomal RNA.	0.999
rpsD	rpsG	NOR53_193	NOR53_184	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.999
rpsD	rpsN	NOR53_193	NOR53_8	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.999
rpsD	rpsO	NOR53_193	NOR53_2745	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999
rpsD	rpsP	NOR53_193	NOR53_1976	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	[J] COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.999
rpsD	rpsQ	NOR53_193	NOR53_286	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
rpsD	rpsS	NOR53_193	NOR53_218	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rpsD	rpsU	NOR53_193	NOR53_506	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	[J] COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.996
rpsD	rsmI	NOR53_193	NOR53_2142	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Conserved hypothetical protein TIGR00096; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.826