truA protein (gamma proteobacterium NOR53) - STRING interaction network

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Score

truA

tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (272 aa)

Predicted Functional Partners:

EED33126.1

0.904

truB

0.852

rpoA

0.831

mraW

0.817

ybeY

0.786

rplQ

0.780

rpsQ

0.774

trpF

0.729

trpA

0.719

trpB

0.702

Your Current Organism:

gamma proteobacterium NOR53

NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EED33126.1	trpA	NOR53_1261	NOR53_2374	LysM domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.	0.602
EED33126.1	trpB	NOR53_1261	NOR53_2119	LysM domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.	0.602
EED33126.1	trpF	NOR53_1261	NOR53_821	LysM domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	[E] COG0135 Phosphoribosylanthranilate isomerase; Belongs to the TrpF family.	0.602
EED33126.1	truA	NOR53_1261	NOR53_2150	LysM domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.904
mraW	rpsQ	NOR53_2292	NOR53_286	S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.423
mraW	truA	NOR53_2292	NOR53_2150	S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.817
mraW	ybeY	NOR53_2292	NOR53_2647	S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	Putative metalloprotease H16_A0526; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.612
rplQ	rpoA	NOR53_200	NOR53_359	[J] COG0203 Ribosomal protein L17.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rplQ	rpsQ	NOR53_200	NOR53_286	[J] COG0203 Ribosomal protein L17.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.998
rplQ	truA	NOR53_200	NOR53_2150	[J] COG0203 Ribosomal protein L17.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.780
rplQ	truB	NOR53_200	NOR53_2789	[J] COG0203 Ribosomal protein L17.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.752
rplQ	ybeY	NOR53_200	NOR53_2647	[J] COG0203 Ribosomal protein L17.	Putative metalloprotease H16_A0526; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.832
rpoA	rplQ	NOR53_359	NOR53_200	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	[J] COG0203 Ribosomal protein L17.	0.998
rpoA	rpsQ	NOR53_359	NOR53_286	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.996
rpoA	truA	NOR53_359	NOR53_2150	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.831
rpoA	truB	NOR53_359	NOR53_2789	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.754
rpsQ	mraW	NOR53_286	NOR53_2292	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	0.423
rpsQ	rplQ	NOR53_286	NOR53_200	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	[J] COG0203 Ribosomal protein L17.	0.998
rpsQ	rpoA	NOR53_286	NOR53_359	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.996
rpsQ	truA	NOR53_286	NOR53_2150	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.774