STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32537.1[C] COG2863 Cytochrome c553. (475 aa)    
Predicted Functional Partners:
EED32536.1
Nickel-dependent hydrogenases b-type cytochrome subunit family; [C] COG1969 Ni,Fe-hydrogenase I cytochrome b subunit.
 
     0.952
EED32535.1
Conserved hypothetical protein; [R] COG2391 Predicted transporter component.
 
     0.938
NOR53_798
Putative rhodanese domain protein; [R] COG2391 Predicted transporter component.
 
   
 0.934
NOR53_18
Hypothetical protein; [R] COG1073 Hydrolases of the alpha/beta superfamily.
   
 
 0.876
EED31548.1
[T] COG2365 Protein tyrosine/serine phosphatase.
   
 
 0.876
EED30394.1
[T] COG2365 Protein tyrosine/serine phosphatase.
   
 
 0.876
EED32547.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin; [O] COG1404 Subtilisin-like serine proteases.
   
 0.767
EED31793.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin; [O] COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
   
 0.767
NOR53_395
Peptidase S8 and S53, subtilisin, kexin, sedolisin; [O] COG1404 Subtilisin-like serine proteases.
   
 0.767
sulP
[R] COG2252 Permeases.
    
   0.696
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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