STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33222.1HesB/YadR/YfhF. (457 aa)    
Predicted Functional Partners:
EED33223.1
Diguanylate cyclase with PAS/PAC sensor; [T] COG2199 FOG: GGDEF domain.
       0.773
EED33221.1
Peptidase M16 inactive domain family protein; [R] COG0612 Predicted Zn-dependent peptidases.
       0.741
NOR53_714
Hypothetical protein; [R] COG0612 Predicted Zn-dependent peptidases; putative peptidaseM16 family.
       0.741
EED33218.1
Peptidase M20; [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
 
     0.576
EED33562.1
Tryptophan halogenase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.545
EED33563.1
TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.523
EED33219.1
Conserved hypothetical protein.
       0.518
NOR53_551
Ser/Thr protein phosphatase family protein.
 
     0.496
EED33559.1
Tryptophan halogenase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.491
NOR53_617
Putative esterase.
  
     0.481
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.