STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33675.1[G] COG0726 Predicted xylanase/chitin deacetylase. (350 aa)    
Predicted Functional Partners:
bax
Bax protein; [R] COG2992 Uncharacterized FlgJ-related protein.
 
     0.934
NOR53_750
[M] COG2951 Membrane-bound lytic murein transglycosylase B.
     
 0.775
EED32254.1
Conserved hypothetical protein.
  
 
 0.696
EED33674.1
[I] COG0657 Esterase/lipase.
       0.636
EED33680.1
Conserved hypothetical protein; [NT] COG0840 Methyl-accepting chemotaxis protein.
       0.487
EED33679.1
[N] COG1360 Flagellar motor protein.
       0.487
EED33678.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.487
EED33681.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.425
uraD
OHCU decarboxylase; [S] COG3195 Uncharacterized protein conserved in bacteria.
 
 
  0.422
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.