STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_217Conserved hypothetical protein. (116 aa)    
Predicted Functional Partners:
NOR53_248
Conserved hypothetical protein.
 
     0.873
NOR53_242
[G] COG0726 Predicted xylanase/chitin deacetylase.
       0.768
EED33153.1
Conserved hypothetical protein.
  
     0.738
EED33075.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.717
NOR53_781
Hypothetical cytosolic protein; [S] COG3089 Uncharacterized protein conserved in bacteria.
  
     0.688
NOR53_729
ApbE family protein; [S] COG2991 Uncharacterized protein conserved in bacteria.
  
     0.581
NOR53_774
Anti-sigma-factor antagonist; [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
     0.556
NOR53_945
Presequence protease, (Pitrilysin metalloproteinase 1); [R] COG0612 Predicted Zn-dependent peptidases.
  
     0.551
EED31494.1
LytB protein; [M] COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
     0.540
NOR53_752
Sodium/hydrogen antiporter; [P] COG0475 Kef-type K+ transport systems, membrane components.
  
     0.512
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.