Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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NOR53_220Cell wall biogenesis protein (WbpE); [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (397 aa)    
Predicted Functional Partners:
EED33978.1
Putative UDP-glucose lipid carrier transferase; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
 
 0.976
EED33753.1
Polysaccharide biosynthesis protein; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases.
 
 
 0.930
NOR53_355
Glycosyl transferase, family 2; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.836
NOR53_173
Polysaccharide biosynthesis protein; [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.767
EED31999.1
Bacterial transferase hexapeptide repeat protein; [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase.
 
 
 0.766
rfbB
dTDP-glucose 4,6-dehydratase; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.761
NOR53_423
Conserved hypothetical protein.
       0.731
NOR53_844
Transferase hexapeptide repeat containing protein; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
  
 
 0.729
NOR53_415
Hypothetical protein.
       0.723
EED31672.1
Glycosyl transferase, WecB/TagA/CpsF family; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 0.717
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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