Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED32492.1AMP-dependent synthetase and ligase; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase. (853 aa)    
Predicted Functional Partners:
EED32491.1
Short-chain dehydrogenase/reductase SDR; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
 
  0.967
EED31664.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
  
  
 0.656
fadJ
Fatty acid oxidation complex, alpha subunit; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 0.590
fadB
Fatty oxidation complex, alpha subunit FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.590
oadA
Oxaloacetate decarboxylase alpha subunit; [I] COG0511 Biotin carboxyl carrier protein.
    
 0.589
NOR53_132
[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
  0.567
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.561
EED32676.1
Putative methylmalonyl-CoA decarboxylasealpha-subunit; [I] COG0825 Acetyl-CoA carboxylase alpha subunit.
    
 0.535
mxaF
Methanol dehydrogenase protein, large subunit; [C] COG2010 Cytochrome c, mono- and diheme variants.
     
  0.512
NOR53_636
Alcohol dehydrogenase (acceptor); [S] COG1520 FOG: WD40-like repeat.
     
  0.512
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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