STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33147.1S1/P1 nuclease; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (323 aa)    
Predicted Functional Partners:
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
    
  0.674
EED33146.1
[I] COG0183 Acetyl-CoA acetyltransferase.
       0.561
EED32324.1
Putative aralkylamine dehydrogenase heavy chain.
     
 0.494
NOR53_18
Hypothetical protein; [R] COG1073 Hydrolases of the alpha/beta superfamily.
    
 0.487
purH
Bifunctional purine biosynthesis protein PurH; [F] COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful).
    
  0.466
gltB
Glutamate synthase, large subunit; [E] COG0069 Glutamate synthase domain 2; Belongs to the glutamate synthase family.
  
  
  0.465
udk
Uridine kinase; [H] COG1072 Panthothenate kinase.
    
  0.462
soxB
Sulfur oxidation protein SoxB; [F] COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family.
    
 0.451
EED32319.1
[R] COG2236 Predicted phosphoribosyltransferases.
  
 
  0.448
EED32513.1
[R] COG2236 Predicted phosphoribosyltransferases.
  
 
  0.443
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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