STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33189.1Putative TonB-dependent receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. (890 aa)    
Predicted Functional Partners:
EED33190.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
   
 0.906
EED31858.1
Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
   0.780
EED31888.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
 
 0.737
EED33993.1
Methyltransferase type 11; [R] COG4798 Predicted methyltransferase.
  
     0.691
EED31451.1
O-methyltransferase; [R] COG4798 Predicted methyltransferase.
  
     0.690
EED31862.1
TonB system biopolymer transport component; [U] COG0811 Biopolymer transport proteins; overlaps another CDS with the same product name.
  
    0.679
EED33341.1
Transporter, OMR family; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
 
  0.670
NOR53_763
Methyltransferase type 11; [R] COG4798 Predicted methyltransferase.
  
     0.665
EED31857.1
Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat.
 
     0.644
EED31863.1
TonB system biopolymer transport component; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit; overlaps another CDS with the same product name.
 
     0.639
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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