Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EED32710.1Glycine cleavage T protein; [R] COG0354 Predicted aminomethyltransferase related to GcvT. (302 aa)    
Predicted Functional Partners:
yhgI
IscR-regulated protein YhgI; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
 0.962
erpA
HesB/YadR/YfhF; Required for insertion of 4Fe-4S clusters for at least IspG.
 
 0.913
EED31647.1
ATPase; [S] COG0316 Uncharacterized conserved protein; Belongs to the HesB/IscA family.
 
 0.862
EED32150.1
Fe(II) trafficking protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.
  
  
 0.661
EED32711.1
TPR repeat region superfamily protein; [S] COG2938 Uncharacterized conserved protein.
       0.641
EED31332.1
Cytochrome oxidase assembly; [O] COG1612 Uncharacterized protein required for cytochrome oxidase assembly.
    
  0.622
NOR53_836
ParA family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
     
 0.603
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
     
  0.582
EED32850.1
Reductive dehalogenase; [C] COG1600 Uncharacterized Fe-S protein.
   
 
 0.580
NOR53_515
Ferredoxin; [C] COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF.
   
 
 0.573
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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