STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33312.1[S] COG3220 Uncharacterized protein conserved in bacteria. (264 aa)    
Predicted Functional Partners:
EED33311.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  
 0.990
EED33313.1
Conserved hypothetical protein; [S] COG3767 Uncharacterized low-complexity protein.
 
  
 0.930
EED33905.1
DoxX family protein; [S] COG2259 Predicted membrane protein.
 
  
 0.871
pacL
Cation-transporting ATPase, E1-E2 family; [P] COG2217 Cation transport ATPase.
   
    0.728
NOR53_208
Hypothetical protein.
   
    0.616
EED31191.1
[T] COG2200 FOG: EAL domain.
   
    0.616
NOR53_561
DoxX; [S] COG2259 Predicted membrane protein.
  
  
 0.588
EED33721.1
[J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
   
    0.545
EED32097.1
Secreted protein.
   
    0.539
NOR53_774
Anti-sigma-factor antagonist; [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
    0.499
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.