Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED32815.1Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (181 aa)    
Predicted Functional Partners:
EED32415.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
  0.826
EED32831.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.762
EED31467.1
[C] COG2863 Cytochrome c553.
   
 
 0.750
EED33871.1
[S] COG3105 Uncharacterized protein conserved in bacteria.
  
     0.729
EED33153.1
Conserved hypothetical protein.
  
     0.726
NOR53_927
Type V secretory pathway, adhesin AidA; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  0.689
EED32644.1
Porin.
   
 0.679
NOR53_296
Flagellar motor protein; [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
  0.673
EED32542.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.670
NOR53_379
OmpA/MotB domain protein; [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
  0.662
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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