STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32402.1Manganese/divalent cation transport protein (nramp); [ER] COG0591 Na+/proline symporter. (406 aa)    
Predicted Functional Partners:
EED31720.1
Natural resistance-associated macrophage protein; [P] COG1914 Mn2+ and Fe2+ transporters of the NRAMP family.
  
     0.770
EED32403.1
[R] COG1216 Predicted glycosyltransferases.
       0.557
pacL
Cation-transporting ATPase, E1-E2 family; [P] COG2217 Cation transport ATPase.
    
 0.494
EED32404.1
Conserved hypothetical protein.
       0.487
rimI
[R] COG0456 Acetyltransferases.
       0.487
EED33532.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.483
EED32406.1
Hypothetical protein.
       0.462
EED32664.1
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
  
 0.456
EED32663.1
Conserved hypothetical protein TIGR00370; [E] COG2049 Allophanate hydrolase subunit 1.
 
    0.421
NOR53_756
Regulator of kinase autophosphorylation inhibitor; [E] COG1984 Allophanate hydrolase subunit 2.
 
  
 0.412
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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