STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bchCChlorophyll synthesis pathway, bchC; [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases. (317 aa)    
Predicted Functional Partners:
bchZ
Chlorophyllide reductase subunit Z; [C] COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains.
 
 
 0.969
bchY
Chlorophyllide reductase subunit Y.
 
 
 0.969
EED32373.1
Chlorophyllide reductase iron protein subunit X; [D] COG0455 ATPases involved in chromosome partitioning; Belongs to the NifH/BchL/ChlL family.
 
 
 0.968
EED32371.1
Hydroxyneurosporene methyltransferase (O-methylase); [QR] COG0500 SAM-dependent methyltransferases.
 
     0.882
bchF
2-vinyl bacteriochlorophyllide hydratase.
  
 
 0.867
EED32395.1
Chlorophyll synthase, (Polyprenyltransferase); [O] COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor).
 
 
 0.865
pufL
Photosynthetic reaction center L subunit; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit; Belongs to the reaction center PufL/M/PsbA/D family.
 
   
 0.856
pufM
Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
 
   
 0.856
chlD
Protoporphyrin IX Magnesium chelatase subunit ChlD; [H] COG1239 Mg-chelatase subunit ChlI.
  
 
 0.853
crtC
Hydroxyneurosporene synthase (CrtC).
 
    0.850
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.