Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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bchCChlorophyll synthesis pathway, bchC; [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases. (317 aa)    
Predicted Functional Partners:
bchY
Chlorophyllide reductase subunit Y.
 
 
 0.966
EED32373.1
Chlorophyllide reductase iron protein subunit X; [D] COG0455 ATPases involved in chromosome partitioning; Belongs to the NifH/BchL/ChlL family.
 
 
 0.965
bchZ
Chlorophyllide reductase subunit Z; [C] COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains.
 
 
 0.965
EED32371.1
Hydroxyneurosporene methyltransferase (O-methylase); [QR] COG0500 SAM-dependent methyltransferases.
 
     0.881
pufL
Photosynthetic reaction center L subunit; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit; Belongs to the reaction center PufL/M/PsbA/D family.
 
     0.854
bchF
2-vinyl bacteriochlorophyllide hydratase.
  
 
 0.853
pufM
Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
 
     0.852
EED32395.1
Chlorophyll synthase, (Polyprenyltransferase); [O] COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor).
 
 
 0.852
crtC
Hydroxyneurosporene synthase (CrtC).
 
    0.850
EED32379.1
photosynthetiC reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.
 
     0.845
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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