Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED32434.1Paraquat-inducible protein B; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (322 aa)    
Predicted Functional Partners:
EED32435.1
[E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.993
EED32436.1
ABC transporter permease protein; [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
 0.990
EED32433.1
[S] COG3009 Uncharacterized protein conserved in bacteria.
 
     0.935
ttg2D
Toluene tolerance protein Ttg2D; [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
  
 0.929
EED32125.1
[T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
 
  0.808
EED31679.1
Glycosyl transferase WecB/TagA/CpsF family; [M] COG1922 Teichoic acid biosynthesis proteins; Belongs to the glycosyltransferase 26 family.
  
  0.676
NOR53_774
Anti-sigma-factor antagonist; [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
  0.676
EED32437.1
Conserved hypothetical protein.
       0.651
NOR53_160
RND efflux system, outer membrane lipoprotein, NodT; [MU] COG1538 Outer membrane protein.
 
     0.612
EED32432.1
[M] COG0668 Small-conductance mechanosensitive channel.
       0.516
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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