STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilV[NU] COG4967 Tfp pilus assembly protein PilV. (129 aa)    
Predicted Functional Partners:
NOR53_71
[NU] COG4966 Tfp pilus assembly protein PilW.
 
  
 0.989
NOR53_209
[NU] COG4726 Tfp pilus assembly protein PilX.
 
  
 0.978
pilY
[NU] COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1.
 
  
 0.976
pilE
Fimbrial protein PilE (MS11 antigen); [NU] COG4968 Tfp pilus assembly protein PilE; Belongs to the N-Me-Phe pilin family.
 
  
 0.811
NOR53_326
[NU] COG4969 Tfp pilus assembly protein, major pilin PilA.
  
  
 0.758
NOR53_375
Prokaryotic N-terminal methylation motif domain protein; [NU] COG4970 Tfp pilus assembly protein FimT.
 
  
 0.754
EED33114.1
[R] COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
  
     0.712
EED33004.1
[NU] COG3215 Tfp pilus assembly protein PilZ.
  
   
 0.709
EED32222.1
[NU] COG3168 Tfp pilus assembly protein PilP.
  
  
 0.695
EED32220.1
[NU] COG3166 Tfp pilus assembly protein PilN.
 
   
 0.682
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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