STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33329.1Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (231 aa)    
Predicted Functional Partners:
EED33330.1
Membrane protein; [M] COG3307 Lipid A core - O-antigen ligase and related enzymes.
  
    0.802
EED32254.1
Conserved hypothetical protein.
  
 
 0.628
EED33832.1
[M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
 0.560
EED31980.1
Glycosyl transferase, family 2; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
 0.479
NOR53_207
[S] COG3551 Uncharacterized protein conserved in bacteria.
 
   
 0.463
EED32226.1
[E] COG0070 Glutamate synthase domain 3.
      
 0.408
EED32772.1
NnrU family protein; [S] COG4094 Predicted membrane protein.
  
     0.404
EED32002.1
Hypothetical protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis; putative glycosyltransferase Sll0501.
  
 
 0.400
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.