STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED33431.1SSS sodium solute transporter superfamily; [ER] COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (474 aa)    
Predicted Functional Partners:
EED33429.1
Galactokinase; [I] COG1577 Mevalonate kinase; Belongs to the GHMP kinase family. GalK subfamily.
 
     0.874
galT
[C] COG1085 Galactose-1-phosphate uridylyltransferase.
 
     0.838
NOR53_998
Putative alpha-galactosidase 2 (Melibiase); [G] COG3345 Alpha-galactosidase.
 
     0.831
EED33428.1
[G] COG1874 Beta-galactosidase.
 
     0.689
NOR53_944
Putative permease, MFS superfamily; [GEPR] COG0477 Permeases of the major facilitator superfamily.
       0.525
EED33426.1
Renal dipeptidase family protein; [E] COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog.
 
     0.478
EED31474.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.449
EED33556.1
Conserved hypothetical protein.
  
     0.442
EED31460.1
[ER] COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.430
EED31437.1
Conserved hypothetical protein.
  
     0.400
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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