STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32526.1Putative urate catabolism protein; [G] COG0726 Predicted xylanase/chitin deacetylase. (315 aa)    
Predicted Functional Partners:
allC
[F] COG4266 Allantoicase; Belongs to the allantoicase family.
 
 
  0.837
uraH
Hydroxyisourate hydrolase; [R] COG2351 Transthyretin-like protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 
  0.831
EED32525.1
Purine nucleoside permease; [S] COG3542 Uncharacterized conserved protein.
       0.783
EED32927.1
[S] COG3748 Predicted membrane protein.
 
    0.765
uraD
OHCU decarboxylase; [S] COG3195 Uncharacterized protein conserved in bacteria.
 
 
  0.717
xdhB
Xanthine dehydrogenase, molybdopterin binding subunit; [C] COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs.
 
     0.701
EED32254.1
Conserved hypothetical protein.
  
 
 0.696
xdhA
[C] COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 
     0.649
EED34042.1
[G] COG0726 Predicted xylanase/chitin deacetylase; overlaps another CDS with the same product name.
 
  
 
0.618
EED34041.1
[G] COG0726 Predicted xylanase/chitin deacetylase; overlaps another CDS with the same product name.
 
  
 
0.614
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.