STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32501.1Nucleoside recognition domain protein; [S] COG3314 Uncharacterized protein conserved in bacteria. (466 aa)    
Predicted Functional Partners:
EED32502.1
Alcohol dehydrogenase, zinc-binding domain protein; [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
       0.741
NOR53_868
[QP] COG4242 Cyanophycinase and related exopeptidases; Belongs to the peptidase S51 family.
       0.741
EED33024.1
[C] COG1757 Na+/H+ antiporter.
  
     0.608
EED32506.1
Isoaspartyl dipeptidase; [F] COG0044 Dihydroorotase and related cyclic amidohydrolases.
  
    0.528
cphA
Cyanophycin synthetase; [M] COG0769 UDP-N-acetylmuramyl tripeptide synthase.
       0.504
EED32505.1
[M] COG0773 UDP-N-acetylmuramate-alanine ligase.
       0.504
EED32500.1
Conserved hypothetical protein.
       0.487
EED31460.1
[ER] COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.441
NOR53_914
[F] COG1972 Nucleoside permease; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.
  
     0.437
EED32499.1
Sulfotransferase; [R] COG0457 FOG: TPR repeat.
       0.415
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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