Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED31436.1[Q] COG1233 Phytoene dehydrogenase and related proteins. (494 aa)    
Predicted Functional Partners:
crtC
Hydroxyneurosporene synthase (CrtC).
 
 
 0.913
NOR53_897
[I] COG1562 Phytoene/squalene synthetase.
 
 
 0.904
EED31437.1
Conserved hypothetical protein.
       0.794
EED32371.1
Hydroxyneurosporene methyltransferase (O-methylase); [QR] COG0500 SAM-dependent methyltransferases.
 
 
  0.747
bchF
2-vinyl bacteriochlorophyllide hydratase.
  
  
 0.680
bchZ
Chlorophyllide reductase subunit Z; [C] COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains.
 
  
 0.660
EED32383.1
Putative photosynthetic complex assembly protein 2.
  
    0.657
EED32395.1
Chlorophyll synthase, (Polyprenyltransferase); [O] COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor).
 
 
  0.653
bchY
Chlorophyllide reductase subunit Y.
 
    0.649
EED32385.1
Photosynthetic complex assembly protein.
  
    0.648
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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