STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_245Hypothetical protein; [V] COG0842 ABC-type multidrug transport system, permease component; ABC-2. (276 aa)    
Predicted Functional Partners:
NOR53_1
Teichoic acids export ATP-binding protein TagH; [V] COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.997
wzt
ABC transporter ATP-binding protein; [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 0.990
NOR53_47
Glycosyl transferase, family 2; [M] COG0438 Glycosyltransferase.
 
  
 0.839
NOR53_87
Methyltransferase domain family protein; [QR] COG0500 SAM-dependent methyltransferases.
 
     0.791
NOR53_244
Hypothetical protein; [R] COG1216 Predicted glycosyltransferases.
  
  
 0.593
EED32833.1
[V] COG0842 ABC-type multidrug transport system, permease component.
    
  0.592
EED32403.1
[R] COG1216 Predicted glycosyltransferases.
 
  
 0.587
EED33965.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.548
EED31677.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.548
EED32014.1
Putative ABC-2 type transporter; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
  
 
0.540
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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