STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31510.1[I] COG1398 Fatty-acid desaturase. (393 aa)    
Predicted Functional Partners:
EED32850.1
Reductive dehalogenase; [C] COG1600 Uncharacterized Fe-S protein.
     
 0.772
EED31771.1
Hypothetical protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); male sterility C-terminal domain.
 
 0.646
EED31435.1
Conserved hypothetical protein.
  
     0.605
EED31511.1
[O] COG0386 Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
    0.582
NOR53_79
ferredoxin--NADP reductase; [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
     
 0.578
EED31155.1
Putative beta-carotene hydroxylase; [I] COG3239 Fatty acid desaturase.
  
 0.550
EED32329.1
[I] COG3239 Fatty acid desaturase.
  
 0.545
EED31509.1
Mate efflux family protein; [V] COG0534 Na+-driven multidrug efflux pump.
       0.542
accC
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
   
  
 0.509
EED32669.1
Putative lipase 4 (Triacylglycerol lipase 4); [R] COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
  
    0.482
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.