Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED31155.1Putative beta-carotene hydroxylase; [I] COG3239 Fatty acid desaturase. (309 aa)    
Predicted Functional Partners:
EED32850.1
Reductive dehalogenase; [C] COG1600 Uncharacterized Fe-S protein.
  
 
 0.719
NOR53_537
Linalool 8-monooxygenase; [Q] COG2124 Cytochrome P450.
 
  
  0.676
EED31154.1
Hypothetical protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins; putative helix-turn-helix- domain containing proteinAraC type taxon:351348.
 
     0.619
EED33188.1
Linalool 8-monooxygenase; [Q] COG2124 Cytochrome P450.
 
  
  0.610
EED32493.1
Hypothetical protein; [R] COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
  
  
  0.558
EED33391.1
Ribonuclease Z; [R] COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III.
  
     0.536
EED32669.1
Putative lipase 4 (Triacylglycerol lipase 4); [R] COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
  
  
  0.531
NOR53_566
Conserved hypothetical protein; [O] COG0625 Glutathione S-transferase.
  
     0.510
EED31510.1
[I] COG1398 Fatty-acid desaturase.
  
 0.489
EED33920.1
Pgap1 family protein; [R] COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold.
  
     0.482
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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