Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED31370.1Conserved hypothetical protein TIGR00275; [R] COG2081 Predicted flavoproteins. (397 aa)    
Predicted Functional Partners:
EED31371.1
[S] COG3310 Uncharacterized protein conserved in bacteria.
  
    0.791
EED32850.1
Reductive dehalogenase; [C] COG1600 Uncharacterized Fe-S protein.
     
  0.578
EED31372.1
Glycosyl hydrolase, family 16.
       0.518
EED33165.1
Hydroxylase; [R] COG3324 Predicted enzyme related to lactoylglutathione lyase.
  
    0.433
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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