Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED31081.1Conserved hypothetical protein; [C] COG4313 Protein involved in meta-pathway of phenol degradation. (298 aa)    
Predicted Functional Partners:
EED31080.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.735
EED31083.1
Conserved hypothetical protein.
 
     0.664
EED31606.1
Conserved hypothetical protein.
 
     0.614
EED31078.1
Conserved hypothetical protein.
 
     0.585
EED31082.1
Conserved hypothetical protein.
 
     0.577
EED31103.1
[S] COG5361 Uncharacterized conserved protein.
  
     0.520
EED31124.1
[S] COG5361 Uncharacterized conserved protein.
  
     0.514
EED31122.1
[S] COG5361 Uncharacterized conserved protein.
  
     0.509
EED31093.1
[S] COG5361 Uncharacterized conserved protein.
  
     0.507
EED31117.1
Hypothetical protein; [S] COG5361 Uncharacterized conserved protein.
  
     0.505
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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