STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31372.1Glycosyl hydrolase, family 16. (269 aa)    
Predicted Functional Partners:
NOR53_466
Glycosyl hydrolase, family 3; [G] COG1472 Beta-glucosidase-related glycosidases.
 
 
 0.728
celD
Glucan 1,4-beta-glucosidase; [G] COG1472 Beta-glucosidase-related glycosidases.
 
 
 0.715
bglX
[G] COG1472 Beta-glucosidase-related glycosidases.
 
 
 0.634
EED32254.1
Conserved hypothetical protein.
 
  
  0.557
EED31370.1
Conserved hypothetical protein TIGR00275; [R] COG2081 Predicted flavoproteins.
       0.518
EED31371.1
[S] COG3310 Uncharacterized protein conserved in bacteria.
       0.518
dnaE2
Putative DNA polymerase III alpha subunit subfamily; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
       0.443
NOR53_964
Hyaluronidase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
    
  0.425
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.