Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED31150.1[J] COG0251 Putative translation initiation inhibitor, yjgF family. (129 aa)    
Predicted Functional Partners:
EED31151.1
cytoChrome c, class I; [C] COG2863 Cytochrome c553.
       0.757
EED31149.1
Putative amine oxidase [flavin-containing] B; [H] COG1232 Protoporphyrinogen oxidase.
       0.663
EED33765.1
P-protein; [E] COG1605 Chorismate mutase.
  
 
 0.592
EED31152.1
Putative epoxide hydrolase 2; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
 
  0.586
EED34040.1
Isochorismatase hydrolase; [Q] COG1335 Amidases related to nicotinamidase.
 
 
 0.480
EED31153.1
Conserved hypothetical protein.
       0.478
EED31148.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.477
aspC
[E] COG1448 Aspartate/tyrosine/aromatic aminotransferase.
   
  0.445
EED31461.1
[GEPR] COG0477 Permeases of the major facilitator superfamily.
  
     0.432
EED33039.1
[M] COG2982 Uncharacterized protein involved in outer membrane biogenesis.
  
    0.404
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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