Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EED31089.1[S] COG3021 Uncharacterized protein conserved in bacteria; protein /y3099/. (277 aa)    
Predicted Functional Partners:
EED31088.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.857
EED31090.1
Hypothetical protein.
       0.543
EED31116.1
Endonuclease/exonuclease/phosphatase family protein; [R] COG3568 Metal-dependent hydrolase.
     
  0.429
NOR53_354
Endonuclease/exonuclease/phosphatase; [S] COG4222 Uncharacterized protein conserved in bacteria.
     
  0.429
EED33727.1
Transmembrane protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.420
EED31440.1
Sensory transduction regulator; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.420
EED31091.1
[K] COG2207 AraC-type DNA-binding domain-containing proteins.
       0.403
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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