rplO protein (gamma proteobacterium NOR53) - STRING interaction network

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rplO

Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (144 aa)

Predicted Functional Partners:

rplN

0.999

rplP

0.999

rpsD

0.999

rplQ

0.999

rpsQ

0.999

rpmD

0.999

rpsM

0.999

NOR53_302

0.999

rplR

0.999

rplD

0.999

Your Current Organism:

gamma proteobacterium NOR53

NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NOR53_302	rplD	NOR53_302	NOR53_309	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	0.999
NOR53_302	rplN	NOR53_302	NOR53_116	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.999
NOR53_302	rplO	NOR53_302	NOR53_26	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
NOR53_302	rplP	NOR53_302	NOR53_156	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.999
NOR53_302	rplQ	NOR53_302	NOR53_200	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	[J] COG0203 Ribosomal protein L17.	0.998
NOR53_302	rplR	NOR53_302	NOR53_306	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
NOR53_302	rpmD	NOR53_302	NOR53_289	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	[J] COG1841 Ribosomal protein L30/L7E.	0.999
NOR53_302	rpsD	NOR53_302	NOR53_193	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
NOR53_302	rpsM	NOR53_302	NOR53_298	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Ribosomal protein S13p/S18e; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.	0.999
NOR53_302	rpsQ	NOR53_302	NOR53_286	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
rplD	NOR53_302	NOR53_309	NOR53_302	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.	0.999
rplD	rplN	NOR53_309	NOR53_116	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.999
rplD	rplO	NOR53_309	NOR53_26	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
rplD	rplP	NOR53_309	NOR53_156	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.999
rplD	rplQ	NOR53_309	NOR53_200	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	[J] COG0203 Ribosomal protein L17.	0.998
rplD	rplR	NOR53_309	NOR53_306	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
rplD	rpmD	NOR53_309	NOR53_289	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	[J] COG1841 Ribosomal protein L30/L7E.	0.998
rplD	rpsD	NOR53_309	NOR53_193	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rplD	rpsM	NOR53_309	NOR53_298	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein S13p/S18e; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.	0.999
rplD	rpsQ	NOR53_309	NOR53_286	Ribosomal protein, L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999